CDS

Accession Number TCMCG007C49568
gbkey CDS
Protein Id XP_009109683.1
Location join(17634764..17634921,17635282..17635445,17635767..17635890,17635986..17636115,17636199..17636266,17636337..17638308,17638386..17638478,17638576..17638698,17638829..17638879)
Gene LOC103835294
GeneID 103835294
Organism Brassica rapa

Protein

Length 960aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009111435.3
Definition protein SCAR3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description regulation of actin nucleation
KEGG_TC -
KEGG_Module M00168        [VIEW IN KEGG]
M00170        [VIEW IN KEGG]
M00171        [VIEW IN KEGG]
M00172        [VIEW IN KEGG]
M00173        [VIEW IN KEGG]
M00346        [VIEW IN KEGG]
M00374        [VIEW IN KEGG]
KEGG_Reaction R00345        [VIEW IN KEGG]
KEGG_rclass RC02741        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01595        [VIEW IN KEGG]
EC 4.1.1.31        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00620        [VIEW IN KEGG]
ko00680        [VIEW IN KEGG]
ko00710        [VIEW IN KEGG]
ko00720        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
map00620        [VIEW IN KEGG]
map00680        [VIEW IN KEGG]
map00710        [VIEW IN KEGG]
map00720        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030838        [VIEW IN EMBL-EBI]
GO:0031209        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032273        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051125        [VIEW IN EMBL-EBI]
GO:0051127        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCTTTCTAGGCTTGGGGTAAGGAATGTGTACGGTACGAGTCAACAAGCCGAGTTTTATGGAAATGTCGATCGTGAAGACCCCGAGGCGATTCTCAACGGCGTTGCAGTCTCTGGACTCATCGGTGTCTTGCGGCAGCTTGGTGATCTCGCTGAGTCGGCAGCAGAGATATTTCAAGGCATACAGGAGGAAGTTATGGCCACAGCTTCAAGAAGCAATCAGTTGAAGATGAGGTTGCAGCATATAGAAGCTACAGTGCCTCCACTAGAAAAGGCGGTACTTGCACAGACAACTCATTTACATTTTGCATACACAGGAGGTGTGGAGTGGCATCCTCGTATCCCACATGAGCAAAATCATTTTATACACGACGACTTGCCTAACTCTTTTATGGATCATTATGAAGAGTGCAGGGATCCTCCACGGTTGCACATGCTTGATAAGTTTGATATAAACGGTCCTGGATCTTGCTTGAAGCGTTACTCAGATCCTACTTATTTCAGAAGAGCATCAAGCAGCCTGGTTAAAGGAAACAACAAGTTCCAAAACAATAACATGAGTTGTAAAATTAAGAAGAAAAAATCTTCATCAAGGAGTCGAGATATGTCACGTCTGGCCTCAATGGCTAACCAGAATGCTAGGAAGACACTTACTTCATTTAGCTTCAGTGGACAAACCTCTTCTTCTAAATCTGCCTCAACCAGTGACATGGAGAAAAGATCTGATCTCCAAGATCATCATTCTCACACTTATGATTGCCTTTCAACTGCAACCTCTTCACTGAAGGCCGGAGAAAAACAGAAAGGGGGGTTAGGTTCATCCAGCTTGACACCGGGCTCTTGCACCATAGGTTCAGTACTCTCTGAATGTGAAACCGAAGATGAACATGATAATTTACAGTTTACTCCTTTGCAAGGGCAATCTGCTGTTGGCTCTTCTTGCGTTAGTTGGGATGAGAAAGCAGAGATAGTGGAAGAACCTCTTGGTGTGCAGACAGATGAAGCATCTGTTGTGGATGCACTAGATGAGAAAGCAACAAGCTATGGAGAAGGCACTGGTAGAGTTGATATTGAAAACGCGGAATCAGAACCAGGACTACAACAAAGTAATGGGATTGATGAGGTAAAGGAGATGAAAGCTGGTTCAGAGATTGTGAGAGAACCGAGGGATAGTAGTGAACATGAGACTGAAAGCGAAGGGGAGTGTTTTGTTGATGCGCTTAATAGTATTGAATCGGAATCTGAAAACGAGCAAGGTCTCAAAACTAGTCTAGAGGCAGTGAGCAGTCCATGTGGTGTTACCGGTGAGAGGTTGGAGAAGAGTTCCAACAAAGTTGAAGAGTCTTGTAGATCGATGGACAACGGTTATTTAAATGCAACTGATGAAATGAATCATCAAGATCCATTGGAGAGTGATAATAGAAGCCGTTCACCGCTCAATGATGTTTGTACAACAAGTAACATTACCTGTGGAGAAGATAAAATCGGTTTTACAGTTGTTCCGGCTCCTGAGAACAGTTTATCTGATTCATCAAACCCCTTGTATCATAGTGAACATCAAAAGTCAGAAGCTAAGGTTTCTGGTGAAGTTGAAGCAATTAAAATATGGACTAATGGAGGTCTATTGGGACTGAACCCATCGAAACCTCCAGTCCTGGAAGTGCCAAGTCTGGATTGCAAGGCCGAGGAAAGGACATTTGGTTCTGCAGAAGCTGAAAAAGATAAATCAGATGATCTAGTTGAACATGTTCTGGATACTTCAAGCTTAGGGACTCAAAATCTAACTGTAGACCAGAGAGAGTGCCATGAGACTTCTTCTTACGGAGTCTTTGGTGGACTGAGCCAAAAGTTATTCACTAATAGTTTCCGCAGAAGAGATTCATTGTCTCATGATAATAGACAAGCTTTACCAGCAACTATTCCAGAAAATGATGAAGTGACTACAGAGAAGAGCAGGTTTGGTGAGCAAGATAAGGTTCTCTTCAGAGAGGAAGCTCCTATTGATTGGTTTGCATCGTCTCCACCTCTTCAACACATGAAAATATCTCTCAATCCCGTTGACAACACCCTTCAGGCGTCAAGGCTGAAGCTGAAATTTTCAGATGAGGACAACAACAGCAATAATACATTTCCTTCCTTTCAGTTGCTTCCAGAGGCTGCTACTTCCCTTCCTGATTCTTGTTCAGACGACGACACTTTCTGTATGACTTCAGACATTGATTATCTTAGCGATTATCACTCCTTGTCAGATTCTGAGCAGTGGGAAGAACACAATGACAGCCATGAAAGAAAAGAGCATGATTCTTTCCATGAAAGTACGCATGTAGATAACAATGGTGAGCCTTCTTCTCTAGACACTGAAGCAGAAAATGGTTGTGTGGCCTTAAACTTCTCTTACCTCCAGAGTCCTGTTGAGCCTTTACCACCGCCGTTTCCACCTGCGCAATGGATGGTTTCTAAAACAGGATCAGAAACAATATCTGAAAACAAAACAACTCAGTCCATACAACTACAAGACGCTCTCAGGTTTGCGTTTGAGAAGCATACTTCATCGTCTATAGTCAACAAAGAAGAGCCTAACACTGTGGCTTCGGCTCCTAAACCAGAAACTAAGGTCCATGTGAAGAATAATGTGAAGGAGGACAAACAAAATGCTAACGAAAAAGAGACTGATGCTGATGACTTCTTGCAACAAATCAGAACACAACATGTCAACCTGAAACCTGTGGTTATGACAAGGACTTTATCTACTGCTGCTGCTGCAACAACTGACCCTGCAATAAACATTAAGATCAGCGCCATGTTGGAGAAAGCAAACTCAATACGCCAGGCTGTAGCTAGCAACGATGGAGATGAAAGTGATACATGGAGCGATACGTAA
Protein:  
MSLSRLGVRNVYGTSQQAEFYGNVDREDPEAILNGVAVSGLIGVLRQLGDLAESAAEIFQGIQEEVMATASRSNQLKMRLQHIEATVPPLEKAVLAQTTHLHFAYTGGVEWHPRIPHEQNHFIHDDLPNSFMDHYEECRDPPRLHMLDKFDINGPGSCLKRYSDPTYFRRASSSLVKGNNKFQNNNMSCKIKKKKSSSRSRDMSRLASMANQNARKTLTSFSFSGQTSSSKSASTSDMEKRSDLQDHHSHTYDCLSTATSSLKAGEKQKGGLGSSSLTPGSCTIGSVLSECETEDEHDNLQFTPLQGQSAVGSSCVSWDEKAEIVEEPLGVQTDEASVVDALDEKATSYGEGTGRVDIENAESEPGLQQSNGIDEVKEMKAGSEIVREPRDSSEHETESEGECFVDALNSIESESENEQGLKTSLEAVSSPCGVTGERLEKSSNKVEESCRSMDNGYLNATDEMNHQDPLESDNRSRSPLNDVCTTSNITCGEDKIGFTVVPAPENSLSDSSNPLYHSEHQKSEAKVSGEVEAIKIWTNGGLLGLNPSKPPVLEVPSLDCKAEERTFGSAEAEKDKSDDLVEHVLDTSSLGTQNLTVDQRECHETSSYGVFGGLSQKLFTNSFRRRDSLSHDNRQALPATIPENDEVTTEKSRFGEQDKVLFREEAPIDWFASSPPLQHMKISLNPVDNTLQASRLKLKFSDEDNNSNNTFPSFQLLPEAATSLPDSCSDDDTFCMTSDIDYLSDYHSLSDSEQWEEHNDSHERKEHDSFHESTHVDNNGEPSSLDTEAENGCVALNFSYLQSPVEPLPPPFPPAQWMVSKTGSETISENKTTQSIQLQDALRFAFEKHTSSSIVNKEEPNTVASAPKPETKVHVKNNVKEDKQNANEKETDADDFLQQIRTQHVNLKPVVMTRTLSTAAAATTDPAINIKISAMLEKANSIRQAVASNDGDESDTWSDT